STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNRPFSmall nuclear ribonucleoprotein F. (86 aa)    
Predicted Functional Partners:
SNRPD1
Small nuclear ribonucleoprotein Sm D1 isoform X1.
   
 0.995
SNRPD3
Small nuclear ribonucleoprotein Sm D3.
   
 0.994
SNRPD2
Small nuclear ribonucleoprotein Sm D2.
   
 0.994
SNRPE-2
Small nuclear ribonucleoprotein E isoform X1.
   
 0.990
SNRPB
Small nuclear ribonucleoprotein-associated proteins B and B' isoform X1.
   
 0.988
SNRPG
Small nuclear ribonucleoprotein G.
   
 0.986
ENSPPRP00000011036
annotation not available
   
 0.956
ENSPPRP00000003690
annotation not available
   
 0.947
LSM10
U7 snRNA-associated Sm-like protein LSm10 isoform X1.
   
 0.946
PHF5A
PHD finger-like domain-containing protein 5A isoform X1.
   
 0.942
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.