STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATN1Atrophin 1. (1192 aa)    
Predicted Functional Partners:
NR2E1
Nuclear receptor subfamily 2 group E member 1 isoform X1.
    
 0.851
TGM6
Protein-glutamine gamma-glutamyltransferase 6.
      
 0.737
JPH3
Junctophilin-3.
      
 0.667
LRCH1
Leucine-rich repeat and calponin homology domain-containing protein 1 isoform X1.
   
  
 0.659
ARSA
Arylsulfatase A isoform X1.
      
 0.657
ATXN2
LOW QUALITY PROTEIN: ataxin-2.
   
  
 0.621
ATXN1
Ataxin 1.
      
 0.618
RTN1
Reticulon-1 isoform X1.
      
 0.569
AR
Androgen receptor isoform X1.
    
 0.567
HTT
LOW QUALITY PROTEIN: huntingtin.
    
 
 0.561
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.