STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109278165ATP-binding cassette, subfamily A (ABC1), member 3. (1743 aa)    
Predicted Functional Partners:
ABCA3
ATP-binding cassette sub-family A member 3 isoform X1.
  
  
 
0.902
SFTPB
Pulmonary surfactant-associated protein B isoform X1.
      
 0.609
SFTPC
Surfactant protein C.
      
 0.604
LPCAT1
Lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase.
   
 
 0.553
PCYT1A
Choline-phosphate cytidylyltransferase A isoform X1.
      
 0.512
HOPX
Homeodomain-only protein isoform X1.
   
  
 0.435
LOC109264486
Pulmonary surfactant-associated protein A-like isoform X1.
    
 
 0.435
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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