Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSPPRP00000012218 | LIG1 | ENSPPRP00000012218 | ENSPPRP00000026820 | annotation not available | DNA ligase 1. | 0.955 |
ENSPPRP00000012218 | LIG3 | ENSPPRP00000012218 | ENSPPRP00000011202 | annotation not available | DNA ligase 3 isoform X1. | 0.826 |
ENSPPRP00000012218 | NEIL1 | ENSPPRP00000012218 | ENSPPRP00000015350 | annotation not available | Endonuclease 8-like 1 isoform X1. | 0.836 |
ENSPPRP00000012218 | NEIL2 | ENSPPRP00000012218 | ENSPPRP00000012480 | annotation not available | Nei like DNA glycosylase 2. | 0.791 |
ENSPPRP00000012218 | OGG1 | ENSPPRP00000012218 | ENSPPRP00000025522 | annotation not available | N-glycosylase/DNA lyase isoform X1. | 0.529 |
ENSPPRP00000012218 | PNKP | ENSPPRP00000012218 | ENSPPRP00000017322 | annotation not available | Polynucleotide kinase 3'-phosphatase. | 0.902 |
ENSPPRP00000012218 | XRCC1 | ENSPPRP00000012218 | ENSPPRP00000018378 | annotation not available | DNA repair protein XRCC1 isoform X1. | 0.948 |
LIG1 | ENSPPRP00000012218 | ENSPPRP00000026820 | ENSPPRP00000012218 | DNA ligase 1. | annotation not available | 0.955 |
LIG1 | LIG3 | ENSPPRP00000026820 | ENSPPRP00000011202 | DNA ligase 1. | DNA ligase 3 isoform X1. | 0.583 |
LIG1 | NEIL1 | ENSPPRP00000026820 | ENSPPRP00000015350 | DNA ligase 1. | Endonuclease 8-like 1 isoform X1. | 0.771 |
LIG1 | OGG1 | ENSPPRP00000026820 | ENSPPRP00000025522 | DNA ligase 1. | N-glycosylase/DNA lyase isoform X1. | 0.647 |
LIG1 | PNKP | ENSPPRP00000026820 | ENSPPRP00000017322 | DNA ligase 1. | Polynucleotide kinase 3'-phosphatase. | 0.620 |
LIG1 | POLB | ENSPPRP00000026820 | ENSPPRP00000006520 | DNA ligase 1. | DNA polymerase beta isoform X1. | 0.955 |
LIG1 | POLL | ENSPPRP00000026820 | ENSPPRP00000025615 | DNA ligase 1. | DNA polymerase lambda. | 0.722 |
LIG1 | XRCC1 | ENSPPRP00000026820 | ENSPPRP00000018378 | DNA ligase 1. | DNA repair protein XRCC1 isoform X1. | 0.896 |
LIG3 | ENSPPRP00000012218 | ENSPPRP00000011202 | ENSPPRP00000012218 | DNA ligase 3 isoform X1. | annotation not available | 0.826 |
LIG3 | LIG1 | ENSPPRP00000011202 | ENSPPRP00000026820 | DNA ligase 3 isoform X1. | DNA ligase 1. | 0.583 |
LIG3 | NEIL1 | ENSPPRP00000011202 | ENSPPRP00000015350 | DNA ligase 3 isoform X1. | Endonuclease 8-like 1 isoform X1. | 0.764 |
LIG3 | NEIL2 | ENSPPRP00000011202 | ENSPPRP00000012480 | DNA ligase 3 isoform X1. | Nei like DNA glycosylase 2. | 0.485 |
LIG3 | OGG1 | ENSPPRP00000011202 | ENSPPRP00000025522 | DNA ligase 3 isoform X1. | N-glycosylase/DNA lyase isoform X1. | 0.407 |
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