STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAE1MRNA export factor isoform X1. (368 aa)    
Predicted Functional Partners:
NUP98
Nuclear pore complex protein Nup98-Nup96 isoform X1.
   
 0.999
NUP214
Nuclear pore complex protein Nup214 isoform X1.
    
 0.993
NXF1
Nuclear RNA export factor 1.
    
 0.991
LOC109260364
Nuclear RNA export factor 2-like.
    
 0.991
GLE1
Nucleoporin GLE1.
   
 0.965
NUP88
Nuclear pore complex protein Nup88.
   
 0.964
NUP153
Nuclear pore complex protein Nup153 isoform X1.
    
 0.958
NUP42
Nucleoporin-like protein 2.
    
 0.956
POM121C
Nuclear envelope pore membrane protein POM 121C isoform X1.
   
 0.946
NUP35
Nuclear pore complex protein Nup53.
   
 
 0.944
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.