STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2orf49Ashwin isoform X1. (232 aa)    
Predicted Functional Partners:
FAM98B
LOW QUALITY PROTEIN: protein FAM98B.
   
 0.941
RTCB
TRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase).
    
 0.938
DDX1
ATP-dependent RNA helicase DDX1.
    
 0.908
FAM98A
Protein FAM98A.
      
 0.760
RTRAF
UPF0568 protein C14orf166 homolog.
    
 0.712
ENSPPRP00000011628
annotation not available
    
 0.712
DHX57
Putative ATP-dependent RNA helicase DHX57 isoform X1.
   
 0.606
DHDH
Dihydrodiol dehydrogenase / D-xylose 1-dehydrogenase (NADP).
   
 
 0.547
ZIC3
Zinc finger protein ZIC 3 isoform X1.
    
 
 0.513
EIF4A2
Eukaryotic initiation factor 4A-II.
    
 0.470
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.