STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109270639ATP-dependent RNA helicase DDX19A isoform X1. (478 aa)    
Predicted Functional Partners:
NUP214
Nuclear pore complex protein Nup214 isoform X1.
    
 
 0.887
GLE1
Nucleoporin GLE1.
    
 
 0.885
CTIF
CBP80/20-dependent translation initiation factor isoform X1.
    
 
 0.619
MIF4GD
MIF4G domain-containing protein.
    
   0.618
PUDP
Pseudouridine 5'-phosphatase.
      
 0.575
XPO1
Exportin-1 isoform X1.
    
 
 0.532
NUP88
Nuclear pore complex protein Nup88.
   
 
 0.532
VPS4A
Vacuolar protein sorting-associated protein 4A isoform X1.
      
 0.517
ENSPPRP00000023392
annotation not available
      
 0.517
DDX49
Probable ATP-dependent RNA helicase DDX49.
  
 
 
0.496
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.