STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC12Coiled-coil domain-containing protein 12. (166 aa)    
Predicted Functional Partners:
CDC40
Pre-mRNA-processing factor 17.
    
  0.996
PRPF19
Pre-mRNA-processing factor 19.
    
   0.967
CDC5L
Cell division cycle 5-like protein.
    
   0.967
EFTUD2
116 kDa U5 small nuclear ribonucleoprotein component.
    
   0.944
CRNKL1
Crooked neck-like protein 1.
    
   0.925
WDR25
WD repeat-containing protein 25 isoform X1.
    
  0.921
SRRM1
Serine/arginine repetitive matrix protein 1 isoform X1.
     
 0.921
PPIL1
Peptidyl-prolyl cis-trans isomerase-like 1.
   
 0.918
CWC27
Peptidyl-prolyl cis-trans isomerase CWC27 homolog isoform X1.
   
 0.908
PPIL2
Peptidyl-prolyl cis-trans isomerase-like 2.
   
 0.908
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.