STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C16orf70UPF0183 protein C16orf70 homolog. (422 aa)    
Predicted Functional Partners:
BCAS3
Breast carcinoma-amplified sequence 3 isoform X1.
   
 
 0.919
WDR45B
WD repeat domain phosphoinositide-interacting protein 3 isoform X1.
   
  
 0.757
WDR45
WD repeat domain phosphoinositide-interacting protein 4 isoform X1.
   
  
 0.732
ZFYVE1
Zinc finger FYVE domain-containing protein 1 isoform X1.
   
  
 0.716
WHAMM
WASP homolog associated with actin, golgi membranes and microtubules.
    
 
 0.632
JMY
Junction-mediating and -regulatory protein.
    
 
 0.615
ATG2A
Autophagy-related protein 2 homolog A isoform X1.
      
 0.610
SAR1B
GTP-binding protein SAR1b.
      
 0.603
PEF1
Peflin isoform X1.
      
 0.595
ATG2B
Autophagy-related protein 2 homolog B isoform X1.
      
 0.586
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.