STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LANCL1LanC-like protein 1. (399 aa)    
Predicted Functional Partners:
SMYD4
SET and MYND domain-containing protein 4 isoform X1.
      
 0.754
ROGDI
Protein rogdi homolog.
      
 0.750
STYXL1
Serine/threonine/tyrosine interacting like 1.
      
 0.739
COPS7A
COP9 signalosome complex subunit 7a isoform X1.
      
 0.727
ALDH16A1
Aldehyde dehydrogenase family 16 member A1 isoform X1.
    
 
 0.636
DHRS3
Short-chain dehydrogenase/reductase 3 isoform X1.
      
 0.634
SRCIN1
SRC kinase signaling inhibitor 1.
      
 0.629
ERI3
ERI1 exoribonuclease 3 isoform X1.
      
 0.601
ENSPPRP00000023617
annotation not available
      
 0.601
PRPF31
U4/U6 small nuclear ribonucleoprotein PRP31.
      
 0.596
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.