STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APOBEC4Putative C->U-editing enzyme APOBEC-4. (368 aa)    
Predicted Functional Partners:
APOBEC2
C->U-editing enzyme APOBEC-2.
     
 0.884
APOBEC1
C->U-editing enzyme APOBEC-1.
     
 0.883
AICDA
Single-stranded DNA cytosine deaminase.
     
 0.771
A1CF
APOBEC1 complementation factor isoform X1.
     
 0.717
LOC109265578
DNA dC->dU-editing enzyme APOBEC-3C-like.
     
 0.674
ENSPPRP00000009193
annotation not available
     
 0.674
LOC109265241
Uncharacterized protein LOC109265241.
     
 0.674
MEAF6
Chromatin modification-related protein MEAF6 isoform X1.
      
 0.627
APOB
Apolipoprotein B-100 isoform X1.
      
 0.617
RBM47
RNA-binding protein 47 isoform X1.
     
 0.560
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.