STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDHR1Cadherin-related family member 1. (859 aa)    
Predicted Functional Partners:
LRRTM1
Leucine-rich repeat transmembrane neuronal protein 1/2.
   
 
 0.639
CTNNB1
Catenin beta 1.
    
 0.614
JUP
Junction plakoglobin.
    
 0.614
C1QL3
Complement C1q-like protein 3.
   
 0.609
KIRREL3
Kin of IRRE-like protein 3 isoform X1.
   
 0.608
ZNF862
Zinc finger protein 862 isoform X1.
    
 0.608
LRIT1
Leucine rich repeat, Ig-like and transmembrane domains 1.
   
 0.588
TPBGL
Trophoblast glycoprotein-like.
     
 0.559
TPBG
Trophoblast glycoprotein.
     
 0.559
LSAMP
Limbic system-associated membrane protein isoform X1.
    
 0.551
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.