STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HPDL4-hydroxyphenylpyruvate dioxygenase-like protein. (372 aa)    
Predicted Functional Partners:
HGD
Homogentisate 1,2-dioxygenase.
  
 0.973
TAT
Tyrosine aminotransferase.
   
 
 0.841
COQ2
4-hydroxybenzoate polyprenyltransferase, mitochondrial isoform X1.
     
 0.818
ENSPPRP00000001294
annotation not available
  
 
 0.807
PCCB
Propionyl-CoA carboxylase beta chain, mitochondrial isoform X1.
  
 
 0.807
MCCC2
Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial isoform X1.
  
 
 0.807
FAH
Fumarylacetoacetate hydrolase.
 
  
 0.769
MCCC1
Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial isoform X1.
  
 
 0.730
PCCA
Propionyl-CoA carboxylase alpha chain, mitochondrial isoform X1.
  
 
 0.730
NELFCD
Negative elongation factor C/D isoform X1.
  
 
 0.730
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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