Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APEX1 | ENSPPRP00000012218 | ENSPPRP00000020836 | ENSPPRP00000012218 | DNA-(apurinic or apyrimidinic site) lyase. | annotation not available | 0.920 |
APEX1 | FEN1 | ENSPPRP00000020836 | ENSPPRP00000026218 | DNA-(apurinic or apyrimidinic site) lyase. | Flap endonuclease 1. | 0.972 |
APEX1 | LIG1 | ENSPPRP00000020836 | ENSPPRP00000026820 | DNA-(apurinic or apyrimidinic site) lyase. | DNA ligase 1. | 0.951 |
APEX1 | PCNA | ENSPPRP00000020836 | ENSPPRP00000027208 | DNA-(apurinic or apyrimidinic site) lyase. | Proliferating cell nuclear antigen. | 0.832 |
APEX1 | POLB | ENSPPRP00000020836 | ENSPPRP00000006520 | DNA-(apurinic or apyrimidinic site) lyase. | DNA polymerase beta isoform X1. | 0.920 |
APEX1 | POLD1 | ENSPPRP00000020836 | ENSPPRP00000003199 | DNA-(apurinic or apyrimidinic site) lyase. | DNA polymerase delta catalytic subunit. | 0.663 |
APEX1 | POLD2 | ENSPPRP00000020836 | ENSPPRP00000013532 | DNA-(apurinic or apyrimidinic site) lyase. | DNA polymerase delta subunit 2. | 0.703 |
APEX1 | WRN | ENSPPRP00000020836 | ENSPPRP00000019600 | DNA-(apurinic or apyrimidinic site) lyase. | Werner syndrome ATP-dependent helicase isoform X1. | 0.446 |
DNA2 | FEN1 | ENSPPRP00000006521 | ENSPPRP00000026218 | DNA replication ATP-dependent helicase/nuclease DNA2 isoform X1. | Flap endonuclease 1. | 0.963 |
DNA2 | LIG1 | ENSPPRP00000006521 | ENSPPRP00000026820 | DNA replication ATP-dependent helicase/nuclease DNA2 isoform X1. | DNA ligase 1. | 0.556 |
DNA2 | MRE11 | ENSPPRP00000006521 | ENSPPRP00000019205 | DNA replication ATP-dependent helicase/nuclease DNA2 isoform X1. | Double-strand break repair protein MRE11A isoform X1. | 0.851 |
DNA2 | PCNA | ENSPPRP00000006521 | ENSPPRP00000027208 | DNA replication ATP-dependent helicase/nuclease DNA2 isoform X1. | Proliferating cell nuclear antigen. | 0.725 |
DNA2 | POLD1 | ENSPPRP00000006521 | ENSPPRP00000003199 | DNA replication ATP-dependent helicase/nuclease DNA2 isoform X1. | DNA polymerase delta catalytic subunit. | 0.838 |
DNA2 | POLD2 | ENSPPRP00000006521 | ENSPPRP00000013532 | DNA replication ATP-dependent helicase/nuclease DNA2 isoform X1. | DNA polymerase delta subunit 2. | 0.739 |
DNA2 | WRN | ENSPPRP00000006521 | ENSPPRP00000019600 | DNA replication ATP-dependent helicase/nuclease DNA2 isoform X1. | Werner syndrome ATP-dependent helicase isoform X1. | 0.986 |
ENSPPRP00000012218 | APEX1 | ENSPPRP00000012218 | ENSPPRP00000020836 | annotation not available | DNA-(apurinic or apyrimidinic site) lyase. | 0.920 |
ENSPPRP00000012218 | FEN1 | ENSPPRP00000012218 | ENSPPRP00000026218 | annotation not available | Flap endonuclease 1. | 0.938 |
ENSPPRP00000012218 | LIG1 | ENSPPRP00000012218 | ENSPPRP00000026820 | annotation not available | DNA ligase 1. | 0.955 |
ENSPPRP00000012218 | MRE11 | ENSPPRP00000012218 | ENSPPRP00000019205 | annotation not available | Double-strand break repair protein MRE11A isoform X1. | 0.435 |
ENSPPRP00000012218 | PCNA | ENSPPRP00000012218 | ENSPPRP00000027208 | annotation not available | Proliferating cell nuclear antigen. | 0.586 |
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