Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALDH18A1 | ENSPPRP00000026628 | ENSPPRP00000002479 | ENSPPRP00000026628 | Delta-1-pyrroline-5-carboxylate synthase isoform X1. | annotation not available | 0.788 |
ALDH18A1 | MALSU1 | ENSPPRP00000002479 | ENSPPRP00000027716 | Delta-1-pyrroline-5-carboxylate synthase isoform X1. | Mitochondrial assembly of ribosomal large subunit protein 1. | 0.739 |
ALDH18A1 | MRPL20 | ENSPPRP00000002479 | ENSPPRP00000017113 | Delta-1-pyrroline-5-carboxylate synthase isoform X1. | 39S ribosomal protein L20, mitochondrial. | 0.419 |
ALDH18A1 | MRPL21 | ENSPPRP00000002479 | ENSPPRP00000001452 | Delta-1-pyrroline-5-carboxylate synthase isoform X1. | Mitochondrial ribosomal protein L21. | 0.780 |
ALDH18A1 | MRPL27 | ENSPPRP00000002479 | ENSPPRP00000017490 | Delta-1-pyrroline-5-carboxylate synthase isoform X1. | 39S ribosomal protein L27, mitochondrial isoform X1. | 0.767 |
ALDH18A1 | MRPL58 | ENSPPRP00000002479 | ENSPPRP00000015974 | Delta-1-pyrroline-5-carboxylate synthase isoform X1. | Peptidyl-tRNA hydrolase ICT1, mitochondrial isoform X1. | 0.485 |
DDX28 | ENSPPRP00000026628 | ENSPPRP00000027118 | ENSPPRP00000026628 | Probable ATP-dependent RNA helicase DDX28. | annotation not available | 0.747 |
DDX28 | MALSU1 | ENSPPRP00000027118 | ENSPPRP00000027716 | Probable ATP-dependent RNA helicase DDX28. | Mitochondrial assembly of ribosomal large subunit protein 1. | 0.878 |
DDX28 | MRM3 | ENSPPRP00000027118 | ENSPPRP00000015504 | Probable ATP-dependent RNA helicase DDX28. | RRNA methyltransferase 3, mitochondrial isoform X1. | 0.951 |
DDX28 | MRPL17 | ENSPPRP00000027118 | ENSPPRP00000029465 | Probable ATP-dependent RNA helicase DDX28. | 39S ribosomal protein L17, mitochondrial. | 0.633 |
DDX28 | MRPL20 | ENSPPRP00000027118 | ENSPPRP00000017113 | Probable ATP-dependent RNA helicase DDX28. | 39S ribosomal protein L20, mitochondrial. | 0.793 |
DDX28 | MRPL21 | ENSPPRP00000027118 | ENSPPRP00000001452 | Probable ATP-dependent RNA helicase DDX28. | Mitochondrial ribosomal protein L21. | 0.584 |
DDX28 | MRPL27 | ENSPPRP00000027118 | ENSPPRP00000017490 | Probable ATP-dependent RNA helicase DDX28. | 39S ribosomal protein L27, mitochondrial isoform X1. | 0.761 |
DDX28 | MRPL32 | ENSPPRP00000027118 | ENSPPRP00000020050 | Probable ATP-dependent RNA helicase DDX28. | 39S ribosomal protein L32, mitochondrial. | 0.645 |
DDX28 | MRPL58 | ENSPPRP00000027118 | ENSPPRP00000015974 | Probable ATP-dependent RNA helicase DDX28. | Peptidyl-tRNA hydrolase ICT1, mitochondrial isoform X1. | 0.796 |
ENSPPRP00000026628 | ALDH18A1 | ENSPPRP00000026628 | ENSPPRP00000002479 | annotation not available | Delta-1-pyrroline-5-carboxylate synthase isoform X1. | 0.788 |
ENSPPRP00000026628 | DDX28 | ENSPPRP00000026628 | ENSPPRP00000027118 | annotation not available | Probable ATP-dependent RNA helicase DDX28. | 0.747 |
ENSPPRP00000026628 | MALSU1 | ENSPPRP00000026628 | ENSPPRP00000027716 | annotation not available | Mitochondrial assembly of ribosomal large subunit protein 1. | 0.753 |
ENSPPRP00000026628 | MRM3 | ENSPPRP00000026628 | ENSPPRP00000015504 | annotation not available | RRNA methyltransferase 3, mitochondrial isoform X1. | 0.680 |
ENSPPRP00000026628 | MRPL17 | ENSPPRP00000026628 | ENSPPRP00000029465 | annotation not available | 39S ribosomal protein L17, mitochondrial. | 0.657 |
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