STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VAPBVesicle-associated membrane protein-associated protein B/C. (243 aa)    
Predicted Functional Partners:
VAPA
Vesicle-associated membrane protein-associated protein A isoform X1.
  
0.976
ATF6
Cyclic AMP-dependent transcription factor ATF-6 alpha isoform X1.
     
 0.933
OSBP
Oxysterol-binding protein 1.
    
 0.888
SNX2
Sorting nexin-2 isoform X1.
   
 
 0.878
STARD3
StAR related lipid transfer domain containing 3.
    
 
 0.829
C9orf72
Guanine nucleotide exchange protein C9orf72.
      
 0.797
ACBD5
Acyl-CoA-binding domain-containing protein 5.
    
 
 0.703
ACBD4
acyl-CoA binding domain containing 4.
    
 
 0.700
ZFYVE27
Protrudin isoform X1.
    
 
 0.697
RMDN2
Regulator of microtubule dynamics protein 2 isoform X1.
    
 0.695
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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