STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109246467Small subunit ribosomal protein S27e. (84 aa)    
Predicted Functional Partners:
FAU
Ubiquitin-like protein fubi and ribosomal protein S30 isoform X1.
   
 0.961
ENSPPRP00000016056
annotation not available
   
 0.961
ENSPPRP00000028102
annotation not available
   
 0.961
ENSPPRP00000029548
annotation not available
   
 0.961
ENSPPRP00000029612
annotation not available
   
 0.961
RPS16
Small subunit ribosomal protein S16e.
   
 0.863
RPS9
Small subunit ribosomal protein S9e.
   
 0.862
ENSPPRP00000007281
annotation not available
   
 0.856
RPS5
Ribosomal protein S5.
   
 0.855
RPS14
Small subunit ribosomal protein S14e.
   
 0.830
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.