STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APOBApolipoprotein B-100 isoform X1. (4428 aa)    
Predicted Functional Partners:
MTTP
Microsomal triglyceride transfer protein large subunit isoform X1.
   
 0.989
APOE
Apolipoprotein E.
   
 0.979
APOC3
Apolipoprotein C-III.
   
 
 0.953
LIPC
Hepatic triacylglycerol lipase.
   
 0.952
SORT1
Sortilin isoform X1.
     
 0.934
P4HB
Prolyl 4-hydroxylase subunit beta.
   
 0.929
SCARB1
Scavenger receptor class B member 1 isoform X1.
    
 0.915
ITSN2
Intersectin-2 isoform X1.
   
 
 0.909
PLG
Plasminogen.
   
 0.882
LIPA
Lysosomal acid lipase/cholesteryl ester hydrolase.
     
 0.869
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.