STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HERC6Probable E3 ubiquitin-protein ligase HERC6. (1020 aa)    
Predicted Functional Partners:
RNF213
E3 ubiquitin-protein ligase RNF213.
   
 
 0.821
ISG15
Ubiquitin-like protein ISG15.
   
 0.756
RIMS4
Regulating synaptic membrane exocytosis protein 4 isoform X1.
      
 0.726
PCYOX1
Prenylcysteine oxidase 1 isoform X1.
      
 0.718
PSMB10
Proteasome subunit beta.
   
 
 0.640
PYURF
Protein preY, mitochondrial.
      
 0.621
LOC105757066
Protein preY, mitochondrial-like.
      
 0.621
UBE2L6
ubiquitin/ISG15-conjugating enzyme E2 L6 isoform X1; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.611
EIF2AK2
Interferon-induced, double-stranded RNA-activated protein kinase.
   
 
 0.590
USP18
LOW QUALITY PROTEIN: ubl carboxyl-terminal hydrolase 18; Belongs to the peptidase C19 family.
   
 
 0.585
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.