STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLDND1Claudin domain-containing protein 1 isoform X1. (351 aa)    
Predicted Functional Partners:
OCEL1
occludin/ELL domain-containing protein 1.
      
 0.522
CDH20
Cadherin-20; Cadherins are calcium-dependent cell adhesion proteins.
      
 0.455
LRIT1
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1.
      
 0.453
GPR182
G-protein coupled receptor 182; Belongs to the G-protein coupled receptor 1 family.
      
 0.452
ZDHHC5
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
   0.449
PDE4A
Phosphodiesterase.
      
 0.446
TATDN1
Putative deoxyribonuclease TATDN1.
      
 0.437
DIRC2
Disrupted in renal carcinoma protein 2.
      
 0.436
APOE
Apolipoprotein E.
  
     0.424
OPALIN
LOW QUALITY PROTEIN: opalin.
      
 0.400
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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