STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPARCL1SPARC-like protein 1. (666 aa)    
Predicted Functional Partners:
LUM
Lumican.
   
  
 0.784
DCN
Decorin; May affect the rate of fibrils formation.
   
  
 0.677
FAM20A
Protein FAM20A isoform X1.
     
 0.650
CBLN2
Cerebellin-2.
   
 
 0.560
APOB
Apolipoprotein B-100.
   
 
  0.554
TECTA
Alpha-tectorin.
   
 
 0.549
ENAM
Enamelin.
  
   
 0.537
JAM2
Junctional adhesion molecule B isoform X1.
   
  
 0.534
TECTB
Beta-tectorin.
      
 0.512
SAMD7
Sterile alpha motif domain-containing protein 7.
  
  
 0.493
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.