STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLHL8Kelch-like protein 8 isoform X1. (618 aa)    
Predicted Functional Partners:
CUL3
Cullin-3 isoform X1; Belongs to the cullin family.
    
 0.769
BNIPL
Bcl-2/adenovirus E1B 19 kDa-interacting protein 2-like protein.
      
 0.730
TRAM1L1
Translocating chain-associated membrane protein; Belongs to the TRAM family.
    
 
 0.723
UGDH
UDP-glucose 6-dehydrogenase; Involved in the biosynthesis of glycosaminoglycans; hyaluronan, chondroitin sulfate, and heparan sulfate. Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
      
 0.720
VCPIP1
Deubiquitinating protein VCIP135.
      
 0.644
SQSTM1
Sequestosome-1.
    
 0.625
RBX1
E3 ubiquitin-protein ligase RBX1 isoform X1.
    
 0.604
KLHL25
Kelch-like protein 25.
  
 
 
0.581
BBS1
Bardet-Biedl syndrome 1 protein isoform X1.
    
 0.574
BBS9
Protein PTHB1 isoform X1.
    
 0.572
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.