LRRC32 protein (Odobenus rosmarus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LRRC32

Leucine-rich repeat-containing protein 32. (663 aa)

Predicted Functional Partners:

TGFB1

0.883

ADGRL3

0.661

ADGRL1

0.661

ADGRL2

0.661

ACOXL

0.653

IKZF4

0.636

GPR83

0.633

LOC101362476

0.617

DAPL1

0.607

IL2RA

0.567

Your Current Organism:

Odobenus rosmarus

NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACOXL	LRRC32	A0A2U3ZF69	A0A2U3VBI1	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	Leucine-rich repeat-containing protein 32.	0.653
ADGRL1	LRRC32	A0A2U3VUI5	A0A2U3VBI1	Latrophilin-1 isoform X1; Belongs to the G-protein coupled receptor 2 family.	Leucine-rich repeat-containing protein 32.	0.661
ADGRL2	LRRC32	A0A2U3WQ08	A0A2U3VBI1	Latrophilin-2 isoform X1; Belongs to the G-protein coupled receptor 2 family.	Leucine-rich repeat-containing protein 32.	0.661
ADGRL3	LRRC32	A0A2U3VJF2	A0A2U3VBI1	Latrophilin-3 isoform X1; Belongs to the G-protein coupled receptor 2 family.	Leucine-rich repeat-containing protein 32.	0.661
DAPL1	GPR83	A0A2U3VJE9	A0A2U3WSZ5	Death-associated protein-like 1.	Probable G-protein coupled receptor 83; Belongs to the G-protein coupled receptor 1 family.	0.447
DAPL1	LRRC32	A0A2U3VJE9	A0A2U3VBI1	Death-associated protein-like 1.	Leucine-rich repeat-containing protein 32.	0.607
GPR83	DAPL1	A0A2U3WSZ5	A0A2U3VJE9	Probable G-protein coupled receptor 83; Belongs to the G-protein coupled receptor 1 family.	Death-associated protein-like 1.	0.447
GPR83	LRRC32	A0A2U3WSZ5	A0A2U3VBI1	Probable G-protein coupled receptor 83; Belongs to the G-protein coupled receptor 1 family.	Leucine-rich repeat-containing protein 32.	0.633
IKZF4	IL2RA	A0A2U3W197	A0A2U3ZS71	Zinc finger protein Eos isoform X1.	Interleukin-2 receptor subunit alpha.	0.471
IKZF4	LRRC32	A0A2U3W197	A0A2U3VBI1	Zinc finger protein Eos isoform X1.	Leucine-rich repeat-containing protein 32.	0.636
IL2RA	IKZF4	A0A2U3ZS71	A0A2U3W197	Interleukin-2 receptor subunit alpha.	Zinc finger protein Eos isoform X1.	0.471
IL2RA	LRRC32	A0A2U3ZS71	A0A2U3VBI1	Interleukin-2 receptor subunit alpha.	Leucine-rich repeat-containing protein 32.	0.567
LOC101362476	LRRC32	A0A2U3ZA14	A0A2U3VBI1	Protein EMSY isoform X1.	Leucine-rich repeat-containing protein 32.	0.617
LRRC32	ACOXL	A0A2U3VBI1	A0A2U3ZF69	Leucine-rich repeat-containing protein 32.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.653
LRRC32	ADGRL1	A0A2U3VBI1	A0A2U3VUI5	Leucine-rich repeat-containing protein 32.	Latrophilin-1 isoform X1; Belongs to the G-protein coupled receptor 2 family.	0.661
LRRC32	ADGRL2	A0A2U3VBI1	A0A2U3WQ08	Leucine-rich repeat-containing protein 32.	Latrophilin-2 isoform X1; Belongs to the G-protein coupled receptor 2 family.	0.661
LRRC32	ADGRL3	A0A2U3VBI1	A0A2U3VJF2	Leucine-rich repeat-containing protein 32.	Latrophilin-3 isoform X1; Belongs to the G-protein coupled receptor 2 family.	0.661
LRRC32	DAPL1	A0A2U3VBI1	A0A2U3VJE9	Leucine-rich repeat-containing protein 32.	Death-associated protein-like 1.	0.607
LRRC32	GPR83	A0A2U3VBI1	A0A2U3WSZ5	Leucine-rich repeat-containing protein 32.	Probable G-protein coupled receptor 83; Belongs to the G-protein coupled receptor 1 family.	0.633
LRRC32	IKZF4	A0A2U3VBI1	A0A2U3W197	Leucine-rich repeat-containing protein 32.	Zinc finger protein Eos isoform X1.	0.636