STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP35Ubiquitin carboxyl-terminal hydrolase 35; Belongs to the peptidase C19 family. (1004 aa)    
Predicted Functional Partners:
USP30
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
      
 0.872
WDR48
WD repeat-containing protein 48 isoform X1.
   
 0.818
RPS27A
ubiquitin-40S ribosomal protein S27a.
    
 0.735
MARCH5
E3 ubiquitin-protein ligase MARCH5 isoform X1.
      
 0.727
UBA52
ubiquitin-60S ribosomal protein L40 isoform X1.
    
 0.725
WDR20
WD repeat-containing protein 20 isoform X2.
   
 0.724
DMWD
Dystrophia myotonica WD repeat-containing protein.
   
 0.724
PEX16
Peroxisomal membrane protein PEX16.
      
 0.718
LOC101372058
Ubiquitin.
    
 0.648
FKBP8
Peptidylprolyl isomerase.
      
 0.618
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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