STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DPPA4Developmental pluripotency-associated protein 4. (307 aa)    
Predicted Functional Partners:
CHPT1
Cholinephosphotransferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
      
 0.614
UTF1
Undifferentiated embryonic cell transcription factor 1.
   
  
 0.570
LIN28A
Protein lin-28 homolog A.
   
  
 0.549
NANOG
Homeobox protein NANOG.
   
 
 0.530
LOC101366870
LOW QUALITY PROTEIN: homeobox protein NANOG-like.
   
 
 0.530
POU5F1
POU domain protein.
   
 0.528
POU5F2
POU domain protein.
   
 0.528
SYTL3
Synaptotagmin-like protein 3 isoform X1.
      
 0.527
SALL4
Sal-like protein 4.
   
  
 0.526
TMEM154
Transmembrane protein 154.
      
 0.524
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.