STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101385030rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1. (330 aa)    
Predicted Functional Partners:
NOP58
Nucleolar protein 58 isoform X1.
   
 0.995
NHP2L1
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.989
RRP9
U3 small nucleolar RNA-interacting protein 2.
   
 0.986
LOC101376589
Nucleolar protein 56-like.
   
 0.985
NOP56
Nucleolar protein 56 isoform X1.
   
 0.985
RPS16
40S ribosomal protein S16 isoform X1; Belongs to the universal ribosomal protein uS9 family.
 
 
 0.979
NOL6
Nucleolar protein 6.
   
 0.967
DKC1
H/ACA ribonucleoprotein complex subunit 4 isoform X1.
   
 
 0.967
CIRH1A
Cirhin isoform X2.
   
 0.959
UTP15
U3 small nucleolar RNA-associated protein 15 homolog isoform X1.
   
 0.955
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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