STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FOXF1Forkhead box protein F1. (381 aa)    
Predicted Functional Partners:
MYOCD
Myocardin.
   
 
 0.544
PAX1
Paired box protein Pax-1.
   
  
 0.540
GATA6
Transcription factor GATA-6.
   
 0.533
CA12
Carbonic anhydrase 12 isoform X1; Belongs to the alpha-carbonic anhydrase family.
   
  
 0.527
BASP1
Brain acid soluble protein 1.
      
 0.522
SRF
Serum response factor isoform X1.
    
 
 0.497
GLI2
Zinc finger protein GLI2.
    
 0.493
BMP4
Bone morphogenetic protein 4.
     
 0.493
GATA4
Transcription factor GATA-4 isoform X1.
   
 0.485
GLI3
Transcriptional activator GLI3.
    
 0.479
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.