STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC22AVesicle-trafficking protein SEC22a; Belongs to the synaptobrevin family. (307 aa)    
Predicted Functional Partners:
BET1
BET1 homolog.
   
 0.946
STX5
Syntaxin-5 isoform X1.
   
 0.936
GOSR2
LOW QUALITY PROTEIN: Golgi SNAP receptor complex member 2.
    
 0.908
BET1L
BET1-like protein.
   
 0.901
YKT6
Synaptobrevin homolog YKT6; Belongs to the synaptobrevin family.
    
 0.898
SCFD1
Sec1 family domain-containing protein 1 isoform X1; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.871
TRAPPC5
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
   
 
 0.867
STX18
Syntaxin-18.
   
 0.853
BNIP1
Vesicle transport protein SEC20 isoform X1.
   
 0.829
USE1
Vesicle transport protein USE1 isoform X1.
    
 0.826
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
Server load: low (30%) [HD]