STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TOPORSE3 ubiquitin-protein ligase Topors isoform X1. (1044 aa)    
Predicted Functional Partners:
RPGR
X-linked retinitis pigmentosa GTPase regulator isoform X1.
      
 0.758
TBL2
Transducin beta-like protein 2.
      
 0.655
LOC101367690
Protein C8orf37 homolog.
      
 0.627
ARL2BP
ADP-ribosylation factor-like protein 2-binding protein.
      
 0.619
UBE2I
SUMO-conjugating enzyme UBC9 isoform X1; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.618
IQCB1
IQ calmodulin-binding motif-containing protein 1 isoform X1.
      
 0.616
B9D2
B9 domain-containing protein 2.
      
 0.615
RPGRIP1L
Protein fantom.
      
 0.614
TMEM231
Transmembrane protein 231.
      
 0.599
KLHL7
Kelch-like protein 7 isoform X1.
      
 0.596
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.