STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARID3CAT-rich interactive domain-containing protein 3C. (411 aa)    
Predicted Functional Partners:
SMARCB1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.
    
 
 0.546
PBRM1
Protein polybromo-1 isoform X1.
   
 
 0.532
BRK1
LOW QUALITY PROTEIN: protein BRICK1.
      
 0.524
PTPRR
Receptor-type tyrosine-protein phosphatase R isoform X1.
      
 0.523
ZCCHC6
Terminal uridylyltransferase 7 isoform X1.
   
  
 0.522
DCTN3
Dynactin subunit 3 isoform X1.
 
    
 0.481
SAP30
Histone deacetylase complex subunit SAP30 isoform X1.
    
 0.471
SAP30L
Histone deacetylase complex subunit SAP30L isoform X1.
    
 0.471
SAP18
Histone deacetylase complex subunit SAP18.
     
 0.466
JARID2
Protein Jumonji.
   
  
0.455
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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