STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT1Signaling threshold-regulating transmembrane adapter 1. (214 aa)    
Predicted Functional Partners:
KIFAP3
Kinesin-associated protein 3 isoform X1.
      
 0.645
THEMIS
Protein THEMIS.
   
  
 0.563
COLEC12
Collectin-12.
      
 0.522
XPNPEP1
xaa-Pro aminopeptidase 1 isoform X1; Belongs to the peptidase M24B family.
      
 0.522
TIFA
TRAF-interacting protein with FHA domain-containing protein A.
      
 0.522
OMD
Osteomodulin.
      
 0.483
SCN7A
Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient.
      
 0.483
CD7
T-cell antigen CD7.
   
  
 0.469
PDLIM1
PDZ and LIM domain protein 1.
   
  
 0.456
OPALIN
LOW QUALITY PROTEIN: opalin.
      
 0.454
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.