STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR42E1Short-chain dehydrogenase/reductase family 42E member 1; Belongs to the 3-beta-HSD family. (393 aa)    
Predicted Functional Partners:
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.829
LOC105757892
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.829
LOC105758044
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.829
LOC101381709
Lanosterol 14-alpha demethylase; Belongs to the cytochrome P450 family.
 
 
 0.826
HSD17B7
3-keto-steroid reductase isoform X1.
   
 0.815
FDFT1
Squalene synthase isoform X1.
  
 
 0.803
SQLE
Squalene monooxygenase.
   
 
 0.803
SC5D
Lathosterol oxidase; Belongs to the sterol desaturase family.
   
 0.784
LSS
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 
 0.773
SIGMAR1
Sigma non-opioid intracellular receptor 1 isoform X1.
   
 
 0.756
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.