STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC40A1Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily. (576 aa)    
Predicted Functional Partners:
HEPH
Hephaestin isoform X1; Belongs to the multicopper oxidase family.
    
 0.977
LOC101371963
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
  
  
 
0.907
HAMP
Hepcidin.
    
 
 0.878
LOC101373931
Ceruloplasmin-like; Belongs to the multicopper oxidase family.
    
 0.837
LOC101374227
Ceruloplasmin; Belongs to the multicopper oxidase family.
    
 0.837
HFE
Hereditary hemochromatosis protein isoform X1; Belongs to the MHC class I family.
      
 0.751
TFR2
Transferrin receptor protein 2.
      
 0.622
ATP13A3
Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.
      
 0.615
ABCB6
ATP-binding cassette sub-family B member 6, mitochondrial.
      
 0.566
HEPHL1
Hephaestin-like protein 1 isoform X1; Belongs to the multicopper oxidase family.
    
 0.565
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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