STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYO1BUnconventional myosin-Ib; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1136 aa)    
Predicted Functional Partners:
CNPY2
Protein canopy homolog 2.
      
 0.524
LOC101379996
Unconventional myosin-IXa.
 
 
 0.519
ACTR2
Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.
    
 0.505
BAZ1B
Tyrosine-protein kinase BAZ1B.
    
  0.486
CALM1
Calmodulin isoform X1; Belongs to the calmodulin family.
    
 0.477
CALM3
Calmodulin isoform X2; Belongs to the calmodulin family.
    
 0.477
LOC101373722
Calmodulin-alpha-like; Belongs to the calmodulin family.
    
 0.477
LOC101372085
calmodulin-A-like; Belongs to the calmodulin family.
    
 0.477
CALM2
Calmodulin isoform X1; Belongs to the calmodulin family.
    
 0.477
CALML3
Calmodulin-like protein 3; Belongs to the calmodulin family.
    
 0.477
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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