STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JAGN1Protein jagunal homolog 1. (183 aa)    
Predicted Functional Partners:
GNB1L
Guanine nucleotide-binding protein subunit beta-like protein 1.
      
 0.872
ITM2B
Integral membrane protein 2B.
      
 0.723
SYNPR
Synaptoporin isoform X1.
      
 0.705
VPS45
Vacuolar protein sorting-associated protein 45 isoform X1; Belongs to the STXBP/unc-18/SEC1 family.
      
 0.699
LOC101375336
Neutrophil elastase; Belongs to the peptidase S1 family.
      
 0.698
GPR37
Prosaposin receptor GPR37.
   
  
 0.698
SCAMP2
Secretory carrier-associated membrane protein.
   
 
 0.656
G6PC3
Glucose-6-phosphatase; Belongs to the glucose-6-phosphatase family.
      
 0.618
SLC37A4
Glucose-6-phosphate translocase isoform X1.
      
 0.617
VPS13B
Vacuolar protein sorting-associated protein 13B isoform X1.
      
 0.615
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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