STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPNE9Copine-9 isoform X1. (553 aa)    
Predicted Functional Partners:
PDE1B
Phosphodiesterase.
      
 0.526
ELAVL2
ELAV-like protein; Belongs to the RRM elav family.
      
 0.524
TDRP
Testis development-related protein.
      
 0.523
ZNF296
Zinc finger protein 296.
      
 0.522
SCN3B
Sodium channel subunit beta-3.
      
 0.521
RNASEH2B
Ribonuclease H2 subunit B isoform X1.
   
 
 0.510
CTXN3
Cortexin-3.
   
  
 0.472
RNASEH2A
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
   
 
 0.452
CHD4
chromodomain-helicase-DNA-binding protein 4 isoform X1.
   
 
 0.452
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.