STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMHD1Deoxynucleoside triphosphate triphosphohydrolase SAMHD1. (627 aa)    
Predicted Functional Partners:
VPRBP
Protein VPRBP isoform X1.
    
 
 0.959
APOB
Apolipoprotein B-100.
      
 0.724
SERINC5
Serine incorporator 5.
      
 0.711
APOBEC3B
DNA dC->dU-editing enzyme APOBEC-3B.
      
 0.698
CCNA2
cyclin-A2 isoform X1; Belongs to the cyclin family.
    
 
 0.622
CUL4A
cullin-4A; Belongs to the cullin family.
    
 
 0.622
TYMS
Thymidylate synthase isoform X1.
     
 0.619
SERINC3
Serine incorporator 3.
      
 0.615
CDK1
Cyclin-dependent kinase 1 isoform X1; Belongs to the protein kinase superfamily.
    
 
 0.614
TK2
Thymidine kinase 2, mitochondrial isoform X1.
    
 
 0.604
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.