STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101368868UPF0183 protein C16orf70 homolog. (422 aa)    
Predicted Functional Partners:
BCAS3
Breast carcinoma-amplified sequence 3 isoform X1.
   
 
 0.917
WDR45B
WD repeat domain phosphoinositide-interacting protein 3.
   
  
 0.768
WDR45
WD repeat domain phosphoinositide-interacting protein 4 isoform X1.
   
  
 0.733
ZFYVE1
Zinc finger FYVE domain-containing protein 1 isoform X1.
   
  
 0.721
WHAMM
WASP homolog-associated protein with actin, membranes and microtubules.
    
 
 0.661
ATG2A
Autophagy-related protein 2 homolog A.
      
 0.617
SAR1B
GTP-binding protein SAR1b; Belongs to the small GTPase superfamily. SAR1 family.
      
 0.615
PLET1
Placenta-expressed transcript 1 protein.
      
 0.615
PEF1
Peflin.
      
 0.606
ATG2B
Autophagy-related protein 2 homolog B.
      
 0.579
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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