STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VAC14Protein VAC14 homolog. (783 aa)    
Predicted Functional Partners:
FIG4
Polyphosphoinositide phosphatase.
    
 0.999
PIKFYVE
1-phosphatidylinositol 3-phosphate 5-kinase isoform X1.
    
 0.996
LOC101373424
Deleted in autism protein 1 isoform X1.
    
 0.911
RAD54L
DNA repair and recombination protein RAD54-like.
 
  
   0.859
RAD54B
DNA repair and recombination protein RAD54B isoform X1.
 
  
   0.845
VPS8
Vacuolar protein sorting-associated protein 8 homolog isoform X1.
   
  
 0.738
STK40
Serine/threonine-protein kinase 40.
   
 
 0.728
CTC1
CST complex subunit CTC1.
      
 0.726
CCZ1
Vacuolar fusion protein CCZ1 homolog.
      
 0.721
DNAJB4
dnaJ homolog subfamily B member 4.
      
 0.712
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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