STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101368971Heterogeneous nuclear ribonucleoprotein A1-like. (320 aa)    
Predicted Functional Partners:
TRA2B
Transformer-2 protein homolog beta isoform X1.
  
 0.691
ALYREF
THO complex subunit 4.
  
 0.685
SRSF1
Serine/arginine-rich splicing factor 1.
  
 0.634
SRSF2
Serine/arginine-rich splicing factor 2.
  
0.611
PTBP1
Polypyrimidine tract-binding protein 1 isoform X1.
   
 0.609
SRSF6
Serine/arginine-rich splicing factor 6.
  
 0.586
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.585
LOC101385960
Heterogeneous nuclear ribonucleoprotein K-like.
   
 0.582
HNRNPK
Heterogeneous nuclear ribonucleoprotein K isoform X1.
   
 0.582
LOC101383144
RNA-binding protein EWS-like.
   
 0.550
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.