STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBRlamin-B receptor. (618 aa)    
Predicted Functional Partners:
LOC101381709
Lanosterol 14-alpha demethylase; Belongs to the cytochrome P450 family.
   
 0.989
MSMO1
Methylsterol monooxygenase 1; Belongs to the sterol desaturase family.
   
 0.967
MECP2
Methyl-CpG-binding protein 2; Chromosomal protein that binds to methylated DNA. It can bind specifically to a single methyl-CpG pair. It is not influenced by sequences flanking the methyl-CpGs. Binds both 5-methylcytosine (5mC) and 5-hydroxymethylcytosine (5hmC)-containing DNA, with a preference for 5-methylcytosine (5mC).
    
 0.955
DHCR24
Delta(24)-sterol reductase.
 
 
 0.937
KPNB1
Importin subunit beta-1 isoform X1.
    
 0.930
EMD
Emerin.
     
 0.915
TM7SF2
Delta(14)-sterol reductase isoform X1.
  
  
 
0.902
SC5D
Lathosterol oxidase; Belongs to the sterol desaturase family.
   
 0.902
LMNB1
lamin-B1 isoform X1; Belongs to the intermediate filament family.
   
 
 0.861
SQLE
Squalene monooxygenase.
   
 
 0.841
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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