STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPDC1LOW QUALITY PROTEIN: protein tyrosine phosphatase domain-containing protein 1. (848 aa)    
Predicted Functional Partners:
ERCC6L
DNA excision repair protein ERCC-6-like.
   
  
 0.774
CCDC73
Coiled-coil domain-containing protein 73.
      
 0.769
KLK9
Kallikrein-9; Belongs to the peptidase S1 family.
      
 0.767
DRD5
D(1B) dopamine receptor; Belongs to the G-protein coupled receptor 1 family.
     
 0.746
KIF20A
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.726
IPPK
Inositol-pentakisphosphate 2-kinase; Phosphorylates Ins(1,3,4,5,6)P5 at position 2 to form Ins(1,2,3,4,5,6)P6 (InsP6 or phytate).
      
 0.724
GPER1
G-protein coupled estrogen receptor 1; Belongs to the G-protein coupled receptor 1 family.
      
 0.723
SETD2
Histone-lysine N-methyltransferase SETD2.
    
 
 0.710
FOXD2
Forkhead box protein D2.
      
 0.694
LOC101374077
5-beta-cholestane-3-alpha,7-alpha-diol 12-alpha-hydroxylase; Belongs to the cytochrome P450 family.
   
  
 0.625
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.