STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCAR1Cell division cycle and apoptosis regulator protein 1. (1150 aa)    
Predicted Functional Partners:
DDX50
ATP-dependent RNA helicase DDX50 isoform X1.
   
 0.777
U2SURP
U2 snRNP-associated SURP motif-containing protein.
   
  
 0.756
STOX1
Storkhead-box protein 1 isoform X1.
 
    
 0.743
TCERG1
Transcription elongation regulator 1 isoform X1.
   
 
  0.737
PRPF40A
pre-mRNA-processing factor 40 homolog A isoform X1.
   
  0.727
LOC101386064
LOW QUALITY PROTEIN: pre-mRNA-processing factor 40 homolog A-like.
   
  0.727
SLC5A10
Sodium/glucose cotransporter 5 isoform X1; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
      
 0.710
NCAPD3
Condensin-2 complex subunit D3; Regulatory subunit of the condensin-2 complex, a complex which establishes mitotic chromosome architecture and is involved in physical rigidity of the chromatid axis.
      
 0.668
SRRT
Serrate RNA effector molecule homolog.
   
 
 0.658
TCERG1L
Transcription elongation regulator 1-like protein.
   
 
  0.646
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.