STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNHIT2Zinc finger HIT domain-containing protein 2. (397 aa)    
Predicted Functional Partners:
AAR2
Protein AAR2 homolog.
    
 
 0.817
TSSC4
Protein TSSC4.
   
 
 0.791
EFTUD2
116 kDa U5 small nuclear ribonucleoprotein component isoform X1.
    
 
 0.756
NENF
Neudesin; Belongs to the cytochrome b5 family.
      
 0.659
RUVBL1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 
 0.651
SNRNP40
U5 small nuclear ribonucleoprotein 40 kDa protein.
    
 
 0.651
RPAP3
RNA polymerase II-associated protein 3 isoform X3.
   
 
 0.648
TTC27
Tetratricopeptide repeat protein 27.
    
 
 0.648
ZNHIT6
Box C/D snoRNA protein 1.
    
 
 0.644
PIH1D1
PIH1 domain-containing protein 1.
    
 
 0.642
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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