STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC132Coiled-coil domain-containing protein 132. (963 aa)    
Predicted Functional Partners:
VPS51
Vacuolar protein sorting-associated protein 51 homolog.
    
 0.981
VPS53
Vacuolar protein sorting-associated protein 53 homolog.
    
 
 0.976
VPS52
Vacuolar protein sorting-associated protein 52 homolog isoform X1.
   
 
 0.938
VPS54
Vacuolar protein sorting-associated protein 54 isoform X1.
   
 
 0.884
TSSC1
Protein TSSC1.
    
 
 0.845
CCDC186
Coiled-coil domain-containing protein 186 isoform X1.
      
 0.705
RBM26
RNA-binding protein 26 isoform X1.
      
 0.664
PCED1A
PC-esterase domain-containing protein 1A isoform X1.
      
 0.652
TOM1L2
TOM1-like protein 2 isoform X1; Belongs to the TOM1 family.
      
 0.620
CCDC138
Coiled-coil domain-containing protein 138 isoform X1.
      
 0.618
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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