STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101363676EF-hand calcium-binding domain-containing protein 1-like. (212 aa)    
Predicted Functional Partners:
ARMC4
Armadillo repeat-containing protein 4 isoform X1.
  
 
 0.660
CASK
Peripheral plasma membrane protein CASK; Belongs to the MAGUK family.
    
 0.635
LOC101384832
UPF0691 protein C9orf116 homolog.
    
 
 0.616
ARMC3
Armadillo repeat-containing protein 3 isoform X1.
   
 
 0.596
TTC25
Tetratricopeptide repeat protein 25.
   
 0.596
EFCAB6
EF-hand calcium-binding domain-containing protein 6.
   
 0.569
LOC101367417
Uncharacterized protein C19orf71 homolog.
    
 
 0.536
PI4KB
Phosphatidylinositol 4-kinase beta isoform X1; Belongs to the PI3/PI4-kinase family.
    
 
 0.506
CFAP52
Cilia- and flagella-associated protein 52 isoform X1.
   
  0.482
TEKT2
Tektin-2.
   
 
 0.476
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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