STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GATAD1GATA zinc finger domain-containing protein 1. (270 aa)    
Predicted Functional Partners:
PHF12
PHD finger protein 12 isoform X1.
    
 
 0.914
KDM5A
Lysine-specific demethylase 5A.
    
 
 0.713
ANKIB1
RBR-type E3 ubiquitin transferase.
 
 
  
 0.704
LOC101362476
Protein EMSY isoform X1.
    
 
 0.659
LOC101375635
Lysine-specific demethylase 5D.
    
 
 0.599
MORF4L1
Mortality factor 4-like protein 1 isoform X1.
    
 
 0.576
MORF4L2
Mortality factor 4-like protein 2.
    
 
 0.576
MYPN
Myopalladin isoform X1.
      
 0.527
CALR3
Calreticulin.
      
 0.527
GPD1L
Glycerol-3-phosphate dehydrogenase [NAD(+)].
      
 0.524
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.