STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARMC7Armadillo repeat-containing protein 7 isoform X1. (198 aa)    
Predicted Functional Partners:
RBM48
RNA-binding protein 48.
  
 
 
 0.932
GPKOW
G patch domain and KOW motifs-containing protein isoform X1.
   
   0.821
SCNM1
Sodium channel modifier 1.
    
 
 0.820
PPIL2
Peptidyl-prolyl cis-trans isomerase-like 2 isoform X1.
    
 
 0.812
SF3B3
Splicing factor 3B subunit 3.
    
   0.808
SF3B1
Splicing factor 3B subunit 1 isoform X1.
    
   0.808
PLRG1
Pleiotropic regulator 1 isoform X1.
    
   0.808
SF3B6
Splicing factor 3B subunit 6.
    
   0.808
SF3B5
Splicing factor 3B subunit 5; Belongs to the SF3B5 family.
    
   0.808
PHF5A
PHD finger-like domain-containing protein 5A.
    
   0.808
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.