STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDHD2Phospholipase DDHD2. (215 aa)    
Predicted Functional Partners:
LOC101373637
Phospholipase DDHD2-like.
 
     0.935
LOC101370674
LOW QUALITY PROTEIN: phospholipase DDHD2-like.
 
     0.919
SEC13
Protein SEC13 homolog isoform X1; Belongs to the WD repeat SEC13 family.
    
 0.547
DDHD1
Phospholipase DDHD1 isoform X1.
 
 
 
 0.536
SEC31A
Protein transport protein Sec31A isoform X1.
    
 0.493
SEC31B
Protein transport protein Sec31B.
    
 0.493
SEC22B
Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family.
     
 0.456
SEC24D
Protein transport protein Sec24D isoform X1.
   
 
 0.455
SEC23B
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.452
SEC23A
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.452
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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