STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPATCH3G patch domain-containing protein 3. (519 aa)    
Predicted Functional Partners:
ZNF408
Zinc finger protein 408.
   
    0.895
SLC25A24
Calcium-binding mitochondrial carrier protein SCaMC-1 isoform X1; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
  
 0.647
PLEKHA8
Pleckstrin homology domain-containing family A member 8 isoform X1.
   
  
 0.623
ZNRF2
E3 ubiquitin-protein ligase ZNRF2.
      
 0.619
RSPRY1
RING finger and SPRY domain-containing protein 1 isoform X1.
      
 0.617
EFCAB1
EF-hand calcium-binding domain-containing protein 1 isoform X1.
      
 0.612
SNX20
Sorting nexin-20.
      
 0.565
EAF1
ELL-associated factor 1.
      
 0.565
FKBP14
Peptidylprolyl isomerase.
    
 
 0.556
CDK14
Cyclin-dependent kinase 14 isoform X1; Belongs to the protein kinase superfamily.
      
 0.541
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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